ctcRbase

Entry Detail

---



General Information

Database ID: SKCM03232 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SLC1A4 Full Name: solute carrier family 1 member 4 Category: mRNA Synonyms: ASCT1|SATT|SPATCCM Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 64988477 End Site(bp): 65023865 Gene Summary: The protein encoded by this gene is a sodium-dependent neutral amino acid transporter for alanine, serine, cysteine, and threonine. Defects in this gene have been associated with developmental delay, microcephaly, and intellectual disability. [provided by RefSeq, Jan 2017] External Links: Ensembl ID: ENSG00000115902 HGNC ID: HGNC:10942 Entrez Gene: 6509

Expression Profile of SLC1A4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-1297 YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-330-5p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-496 YES YES NO hsa-miR-98-5p YES YES YES Display: