ctcRbase

Entry Detail

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General Information

Database ID: SKCM03234 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: JMJD6 Full Name: jumonji domain containing 6, arginine demethylase and lysine hydroxylase Category: mRNA Synonyms: PSR|PTDSR|PTDSR1 Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 76712832 End Site(bp): 76726799 Gene Summary: This gene encodes a nuclear protein with a JmjC domain. JmjC domain-containing proteins are predicted to function as protein hydroxylases or histone demethylases. This protein was first identified as a putative phosphatidylserine receptor involved in phagocytosis of apoptotic cells; however, subsequent studies have indicated that it does not directly function in the clearance of apoptotic cells, and questioned whether it is a true phosphatidylserine receptor. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000070495 HGNC ID: HGNC:19355 Entrez Gene: 23210

Expression Profile of JMJD6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-96-5p YES YES YES Display: