ctcRbase

Entry Detail

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General Information

Database ID: SKCM03238 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SMCHD1 Full Name: structural maintenance of chromosomes flexible hinge domain containing 1 Category: mRNA Synonyms: BAMS|FSHD2 Chromosome: chr18 Strand: + Coordinate: Start Site(bp): 2655738 End Site(bp): 2805017 Gene Summary: This gene encodes a protein which contains a hinge region domain found in members of the SMC (structural maintenance of chromosomes) protein family. [provided by RefSeq, Dec 2011] External Links: Ensembl ID: ENSG00000101596 HGNC ID: HGNC:29090 Entrez Gene: 23347

Expression Profile of SMCHD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO YES hsa-miR-107 YES NO YES hsa-miR-129-5p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-145-5p YES YES NO hsa-miR-154-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-224-5p YES YES YES hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-300 YES YES NO hsa-miR-323a-3p YES NO YES hsa-miR-329-3p YES NO NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES NO YES hsa-miR-362-3p YES NO NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-448 YES YES NO hsa-miR-455-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-758-3p YES YES NO Display: