ctcRbase

Entry Detail

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General Information

Database ID: SKCM03277 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: BNIP3 Full Name: BCL2 interacting protein 3 Category: mRNA Synonyms: NIP3 Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 131966455 End Site(bp): 131982013 Gene Summary: This gene is encodes a mitochondrial protein that contains a BH3 domain and acts as a pro-apoptotic factor. The encoded protein interacts with anti-apoptotic proteins, including the E1B 19 kDa protein and Bcl2. This gene is silenced in tumors by DNA methylation. [provided by RefSeq, Dec 2014] External Links: Ensembl ID: ENSG00000176171 HGNC ID: HGNC:1084 Entrez Gene: 664

Expression Profile of BNIP3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-324-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-429 YES YES NO Display: