Entry Detail



General Information

Database ID:SKCM03320
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:PRPF8
Full Name:pre-mRNA processing factor 8
Category:mRNA
Synonyms:HPRP8|PRP8|PRPC8|RP13|SNRNP220
Chromosome:chr17
Strand:-
Coordinate:
Start Site(bp):1650629End Site(bp):1684882
Gene Summary:Pre-mRNA splicing occurs in 2 sequential transesterification steps. The protein encoded by this gene is a component of both U2- and U12-dependent spliceosomes, and found to be essential for the catalytic step II in pre-mRNA splicing process. It contains several WD repeats, which function in protein-protein interactions. This protein has a sequence similarity to yeast Prp8 protein. This gene is a candidate gene for autosomal dominant retinitis pigmentosa. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000174231
HGNC ID:HGNC:17340
Entrez Gene:10594



Expression Profile of PRPF8 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-300
YES
YES
YES
hsa-miR-381-3p
YES
YES
YES
hsa-miR-505-3p
YES
YES
NO
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