ctcRbase

Entry Detail

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General Information

Database ID: SKCM03330 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: OIP5 Full Name: Opa interacting protein 5 Category: mRNA Synonyms: 5730547N13Rik|CT86|LINT-25|MIS18B|MIS18beta|hMIS18beta Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 41309268 End Site(bp): 41332621 Gene Summary: The protein encoded by this gene localizes to centromeres, where it is essential for recruitment of CENP-A through the mediator Holliday junction recognition protein. Expression of this gene is upregulated in several cancers, making it a putative therapeutic target. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2015] External Links: Ensembl ID: ENSG00000104147 HGNC ID: HGNC:20300 Entrez Gene: 11339

Expression Profile of OIP5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-124-3p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-505-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-653-5p YES YES NO hsa-miR-93-5p YES YES NO Display: