ctcRbase

Entry Detail

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General Information

Database ID: SKCM03352 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SEPHS1 Full Name: selenophosphate synthetase 1 Category: mRNA Synonyms: SELD|SPS|SPS1 Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 13317424 End Site(bp): 13348298 Gene Summary: This gene encodes an enzyme that synthesizes selenophosphate from selenide and ATP. Selenophosphate is the selenium donor used to synthesize selenocysteine, which is co-translationally incorporated into selenoproteins at in-frame UGA codons. [provided by RefSeq, Sep 2010] External Links: Ensembl ID: ENSG00000086475 HGNC ID: HGNC:19685 Entrez Gene: 22929

Expression Profile of SEPHS1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-124-3p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-155-5p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-194-5p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-219a-2-3p YES NO YES hsa-miR-22-3p YES YES YES hsa-miR-23a-3p NO YES YES hsa-miR-23b-3p NO YES YES hsa-miR-25-3p YES YES NO hsa-miR-30a-5p NO YES YES hsa-miR-30b-5p NO YES YES hsa-miR-30d-5p NO YES YES hsa-miR-30e-5p NO YES YES hsa-miR-31-5p YES YES YES hsa-miR-32-5p YES YES NO hsa-miR-363-3p YES YES NO hsa-miR-367-3p YES YES NO hsa-miR-409-3p YES NO YES hsa-miR-421 YES YES YES hsa-miR-455-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-496 YES YES YES hsa-miR-506-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-599 YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-876-5p YES YES YES hsa-miR-92a-3p YES YES NO hsa-miR-92b-3p YES YES NO Display: