ctcRbase

Entry Detail

---



General Information

Database ID: SKCM03380 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SHQ1 Full Name: SHQ1, H/ACA ribonucleoprotein assembly factor Category: mRNA Synonyms: GRIM-1|Shq1p Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 72749277 End Site(bp): 72861914 Gene Summary: SHQ1 assists in the assembly of H/ACA-box ribonucleoproteins that function in the processing of ribosomal RNAs, modification of spliceosomal small nuclear RNAs, and stabilization of telomerase (see MIM 602322) (Grozdanov et al., 2009 [PubMed 19383767]).[supplied by OMIM, Dec 2010] External Links: Ensembl ID: ENSG00000144736 HGNC ID: HGNC:25543 Entrez Gene: 55164

Expression Profile of SHQ1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-9-5p YES YES NO Display: