ctcRbase

Entry Detail

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General Information

Database ID: SKCM03383 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: KDM1A Full Name: lysine demethylase 1A Category: mRNA Synonyms: AOF2|BHC110|CPRF|KDM1|LSD1 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 23019448 End Site(bp): 23083689 Gene Summary: This gene encodes a nuclear protein containing a SWIRM domain, a FAD-binding motif, and an amine oxidase domain. This protein is a component of several histone deacetylase complexes, though it silences genes by functioning as a histone demethylase. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2009] External Links: Ensembl ID: ENSG00000004487 HGNC ID: HGNC:29079 Entrez Gene: 23028

Expression Profile of KDM1A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-137 YES YES YES hsa-miR-28-5p YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-708-5p YES YES NO hsa-miR-876-5p YES YES NO Display: