ctcRbase

Entry Detail

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General Information

Database ID: SKCM03384 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RBM17 Full Name: RNA binding motif protein 17 Category: mRNA Synonyms: SPF45 Chromosome: chr10 Strand: + Coordinate: Start Site(bp): 6088987 End Site(bp): 6117457 Gene Summary: This gene encodes an RNA binding protein. The encoded protein is part of the spliceosome complex and functions in the second catalytic step of mRNA splicing. Alternatively spliced transcript variants have been described. Related pseudogenes exist on chromosomes 9 and 15. [provided by RefSeq, Mar 2009] External Links: Ensembl ID: ENSG00000134453 HGNC ID: HGNC:16944 Entrez Gene: 84991

Expression Profile of RBM17 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-139-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-485-5p YES YES NO hsa-miR-876-5p YES YES NO Display: