Entry Detail



General Information

Database ID:SKCM03398
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:GAR1
Full Name:GAR1 ribonucleoprotein
Category:mRNA
Synonyms:NOLA1
Chromosome:chr4
Strand:+
Coordinate:
Start Site(bp):109815510End Site(bp):109824740
Gene Summary:This gene is a member of the H/ACA snoRNPs (small nucleolar ribonucleoproteins) gene family. snoRNPs are involved in various aspects of rRNA processing and modification and have been classified into two families: C/D and H/ACA. The H/ACA snoRNPs also include the DKC1, NOLA2 and NOLA3 proteins. These four H/ACA snoRNP proteins localize to the dense fibrillar components of nucleoli and to coiled (Cajal) bodies in the nucleus. Both 18S rRNA production and rRNA pseudouridylation are impaired if any one of the four proteins is depleted. These four H/ACA snoRNP proteins are also components of the telomerase complex. The encoded protein of this gene contains two glycine- and arginine-rich domains and is related to Saccharomyces cerevisiae Gar1p. Two splice variants have been found for this gene. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000109534
HGNC ID:HGNC:14264
Entrez Gene:54433



Expression Profile of GAR1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-141-3p
YES
YES
NO
hsa-miR-200a-3p
YES
YES
NO
hsa-miR-224-5p
YES
YES
NO
Display: