ctcRbase

Entry Detail

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General Information

Database ID: SKCM03439 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: LETM1 Full Name: leucine zipper and EF-hand containing transmembrane protein 1 Category: mRNA Synonyms: SLC55A1 Chromosome: chr4 Strand: - Coordinate: Start Site(bp): 1811479 End Site(bp): 1856247 Gene Summary: This gene encodes a protein that is localized to the inner mitochondrial membrane. The protein functions to maintain the mitochondrial tubular shapes and is required for normal mitochondrial morphology and cellular viability. Mutations in this gene cause Wolf-Hirschhorn syndrome, a complex malformation syndrome caused by the deletion of parts of the distal short arm of chromosome 4. Related pseudogenes have been identified on chromosomes 8, 15 and 19. [provided by RefSeq, Oct 2009] External Links: Ensembl ID: ENSG00000168924 HGNC ID: HGNC:6556 Entrez Gene: 3954

Expression Profile of LETM1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES YES hsa-miR-1-3p YES NO YES hsa-miR-197-3p YES YES NO hsa-miR-206 YES NO YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-495-3p YES YES NO hsa-miR-613 YES NO YES hsa-miR-7-5p YES YES NO Display: