Entry Detail



General Information

Database ID:SKCM03470
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:VPS72
Full Name:vacuolar protein sorting 72 homolog
Category:mRNA
Synonyms:CFL1|Swc2|TCFL1|YL-1|YL1
Chromosome:chr1
Strand:-
Coordinate:
Start Site(bp):151169987End Site(bp):151195321
Gene Summary:The protein encoded by this gene is a shared subunit of two multi-component complexes, the histone acetyltransferase complex TRRAP/TIP60 as well as the chromatin remodeling SRCAP-containing complex. The TRRAP/TIP60 complex acetylates nucleosomal histones important for transcriptional regulation, double strand DNA break repair and apoptosis. The SRCAP-containing complex catalyzes the exchange of histone H2A with the histone variant Htz1 (H2AFZ) into nucleosomes. This protein may be responsible for binding H2AFZ, which has a role in chromosome segregation. This protein may also have a role in regulating long-term hematopoietic stem cell activity. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Aug 2012]
External Links:
Ensembl ID:ENSG00000163159
HGNC ID:HGNC:11644
Entrez Gene:6944



Expression Profile of VPS72 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-143-3p
YES
YES
NO
hsa-miR-191-5p
YES
YES
NO
hsa-miR-335-5p
YES
YES
NO
hsa-miR-383-5p
YES
YES
NO
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