ctcRbase

Entry Detail

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General Information

Database ID: SKCM03488 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: NR1D2 Full Name: nuclear receptor subfamily 1 group D member 2 Category: mRNA Synonyms: BD73|EAR-1R|REVERBB|REVERBbeta|RVR Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 23945260 End Site(bp): 23980618 Gene Summary: This gene encodes a member of the nuclear hormone receptor family, specifically the NR1 subfamily of receptors. The encoded protein functions as a transcriptional repressor and may play a role in circadian rhythms and carbohydrate and lipid metabolism. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009] External Links: Ensembl ID: ENSG00000174738 HGNC ID: HGNC:7963 Entrez Gene: 9975

Expression Profile of NR1D2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p NO YES YES hsa-miR-103a-3p YES NO YES hsa-miR-107 YES NO YES hsa-miR-128-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-142-3p YES YES YES hsa-miR-145-5p YES YES NO hsa-miR-150-5p YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-181a-5p NO YES YES hsa-miR-181b-5p NO YES YES hsa-miR-181c-5p NO YES YES hsa-miR-181d-5p NO YES YES hsa-miR-182-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-210-3p YES YES NO hsa-miR-218-5p NO YES YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-342-3p YES YES NO hsa-miR-365a-3p NO YES YES hsa-miR-377-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-543 YES YES YES hsa-miR-875-5p YES YES NO Display: