ctcRbase

Entry Detail

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General Information

Database ID: SKCM03517 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HES1 Full Name: hes family bHLH transcription factor 1 Category: mRNA Synonyms: HES-1|HHL|HRY|bHLHb39 Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 194136145 End Site(bp): 194138732 Gene Summary: This protein belongs to the basic helix-loop-helix family of transcription factors. It is a transcriptional repressor of genes that require a bHLH protein for their transcription. The protein has a particular type of basic domain that contains a helix interrupting protein that binds to the N-box rather than the canonical E-box. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000114315 HGNC ID: HGNC:5192 Entrez Gene: 3280

Expression Profile of HES1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES YES hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-369-3p YES NO YES hsa-miR-371a-5p YES YES NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-655-3p YES NO YES hsa-miR-9-5p YES YES YES hsa-miR-96-5p YES YES YES Display: