ctcRbase

Entry Detail

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General Information

Database ID: SKCM03520 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CASK Full Name: calcium/calmodulin dependent serine protein kinase Category: mRNA Synonyms: CAGH39|CAMGUK|CMG|FGS4|LIN2|MICPCH|MRXSNA|TNRC8|hCASK Chromosome: chrX Strand: - Coordinate: Start Site(bp): 41514934 End Site(bp): 41923463 Gene Summary: This gene encodes a calcium/calmodulin-dependent serine protein kinase. The encoded protein is a MAGUK (membrane-associated guanylate kinase) protein family member. These proteins are scaffold proteins and the encoded protein is located at synapses in the brain. Mutations in this gene are associated with FG syndrome 4, intellectual disability and microcephaly with pontine and cerebellar hypoplasia, and a form of X-linked intellectual disability. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2017] External Links: Ensembl ID: ENSG00000147044 HGNC ID: HGNC:1497 Entrez Gene: 8573

Expression Profile of CASK Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p NO YES YES hsa-miR-107 NO YES YES hsa-miR-1-3p NO YES YES hsa-miR-142-3p NO YES YES hsa-miR-144-3p NO YES YES hsa-miR-146a-5p YES YES YES hsa-miR-146b-5p YES YES YES hsa-miR-153-3p NO YES YES hsa-miR-15a-5p NO YES YES hsa-miR-15b-5p NO YES YES hsa-miR-16-5p NO YES YES hsa-miR-186-5p NO YES YES hsa-miR-191-5p NO YES YES hsa-miR-194-5p NO YES YES hsa-miR-195-5p NO YES YES hsa-miR-196a-5p YES YES YES hsa-miR-196b-5p YES YES YES hsa-miR-206 NO YES YES hsa-miR-216b-5p NO YES YES hsa-miR-23a-3p NO YES YES hsa-miR-23b-3p NO YES YES hsa-miR-25-3p NO YES YES hsa-miR-32-5p NO YES YES hsa-miR-340-5p NO YES YES hsa-miR-363-3p NO YES YES hsa-miR-367-3p NO YES YES hsa-miR-370-3p YES NO YES hsa-miR-410-3p YES YES YES hsa-miR-424-5p NO YES YES hsa-miR-497-5p NO YES YES hsa-miR-543 YES YES YES hsa-miR-613 NO YES YES hsa-miR-92a-3p NO YES YES hsa-miR-92b-3p NO YES YES Display: