ctcRbase

Entry Detail

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General Information

Database ID: SKCM03558 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TRIM16 Full Name: tripartite motif containing 16 Category: mRNA Synonyms: EBBP Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 15627960 End Site(bp): 15684311 Gene Summary: The protein encoded by this gene is a tripartite motif (TRIM) family member that contains two B box domains and a coiled-coiled region that are characteristic of the B box zinc finger protein family. While it lacks a RING domain found in other TRIM proteins, the encoded protein can homodimerize or heterodimerize with other TRIM proteins and has E3 ubiquitin ligase activity. This gene is also a tumor suppressor and is involved in secretory autophagy. [provided by RefSeq, Jan 2017] External Links: Ensembl ID: ENSG00000221926 HGNC ID: HGNC:17241 Entrez Gene: 10626

Expression Profile of TRIM16 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-485-5p YES YES NO Display: