ctcRbase

Entry Detail

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General Information

Database ID: SKCM03595 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: KHSRP Full Name: KH-type splicing regulatory protein Category: mRNA Synonyms: FBP2|FUBP2|KSRP|p75 Chromosome: chr19 Strand: - Coordinate: Start Site(bp): 6413348 End Site(bp): 6424794 Gene Summary: The KHSRP gene encodes a multifunctional RNA-binding protein implicated in a variety of cellular processes, including transcription, alternative pre-mRNA splicing, and mRNA localization (Min et al., 1997 [PubMed 9136930]; Gherzi et al., 2004 [PubMed 15175153]).[supplied by OMIM, Apr 2010] External Links: Ensembl ID: ENSG00000088247 HGNC ID: HGNC:6316 Entrez Gene: 8570

Expression Profile of KHSRP Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-1-3p YES YES YES hsa-miR-149-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-206 YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-300 YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-375 YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-599 YES YES NO hsa-miR-613 YES YES YES hsa-miR-758-3p YES YES YES hsa-miR-96-5p YES YES NO Display: