ctcRbase

Entry Detail

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General Information

Database ID: SKCM03635 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SEC23B Full Name: Sec23 homolog B, coat complex II component Category: mRNA Synonyms: CDA-II|CDAII|CDAN2|CWS7|HEMPAS|hSec23B Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 18507493 End Site(bp): 18561415 Gene Summary: The protein encoded by this gene is a member of the SEC23 subfamily of the SEC23/SEC24 family, which is involved in vesicle trafficking. The encoded protein has similarity to yeast Sec23p component of COPII. COPII is the coat protein complex responsible for vesicle budding from the ER. The function of this gene product has been implicated in cargo selection and concentration. Multiple alternatively spliced transcript variants have been identified in this gene. [provided by RefSeq, Feb 2010] External Links: Ensembl ID: ENSG00000101310 HGNC ID: HGNC:10702 Entrez Gene: 10483

Expression Profile of SEC23B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-1-3p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-192-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-206 YES YES YES hsa-miR-215-5p YES YES NO hsa-miR-22-3p YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-323a-3p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-448 YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-613 YES YES YES hsa-miR-873-5p YES YES NO Display: