ctcRbase

Entry Detail

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General Information

Database ID: SKCM03646 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CSNK2A1 Full Name: casein kinase 2 alpha 1 Category: mRNA Synonyms: CK2A1|CKII|Cka1|Cka2|OCNDS Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 473591 End Site(bp): 543821 Gene Summary: Casein kinase II is a serine/threonine protein kinase that phosphorylates acidic proteins such as casein. It is involved in various cellular processes, including cell cycle control, apoptosis, and circadian rhythm. The kinase exists as a tetramer and is composed of an alpha, an alpha-prime, and two beta subunits. The alpha subunits contain the catalytic activity while the beta subunits undergo autophosphorylation. The protein encoded by this gene represents the alpha subunit. Multiple transcript variants encoding different protein isoforms have been found for this gene. [provided by RefSeq, Apr 2018] External Links: Ensembl ID: ENSG00000101266 HGNC ID: HGNC:2457 Entrez Gene: 1457

Expression Profile of CSNK2A1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-138-5p YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-143-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-194-5p YES NO YES hsa-miR-200a-3p YES YES YES hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES YES YES hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-326 YES NO YES hsa-miR-329-3p YES YES YES hsa-miR-330-5p YES NO YES hsa-miR-331-3p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-346 YES YES NO hsa-miR-362-3p YES YES YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-375 YES YES YES hsa-miR-379-5p YES YES NO hsa-miR-485-5p YES YES YES hsa-miR-486-5p YES YES NO hsa-miR-758-3p YES YES NO hsa-miR-760 YES NO YES hsa-miR-802 YES NO YES hsa-miR-876-5p YES YES NO Display: