ctcRbase

Entry Detail

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General Information

Database ID: SKCM03650 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SBF2 Full Name: SET binding factor 2 Category: mRNA Synonyms: CMT4B2|DENND7B|MTMR13 Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 9778667 End Site(bp): 10294207 Gene Summary: This gene encodes a pseudophosphatase and member of the myotubularin-related protein family. This gene maps within the CMT4B2 candidate region of chromosome 11p15 and mutations in this gene have been associated with Charcot-Marie-Tooth Disease, type 4B2. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000133812 HGNC ID: HGNC:2135 Entrez Gene: 81846

Expression Profile of SBF2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-142-3p YES YES NO hsa-miR-145-5p YES YES YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-205-5p YES YES YES hsa-miR-24-3p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-300 YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-384 YES YES YES hsa-miR-454-3p YES YES YES hsa-miR-455-5p YES YES NO Display: