ctcRbase

Entry Detail

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General Information

Database ID: SKCM03660 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SEL1L Full Name: SEL1L, ERAD E3 ligase adaptor subunit Category: mRNA Synonyms: PRO1063|SEL1-LIKE|SEL1L1 Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 81471549 End Site(bp): 81533861 Gene Summary: The protein encoded by this gene is part of a protein complex required for the retrotranslocation or dislocation of misfolded proteins from the endoplasmic reticulum lumen to the cytosol, where they are degraded by the proteasome in a ubiquitin-dependent manner. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011] External Links: Ensembl ID: ENSG00000071537 HGNC ID: HGNC:10717 Entrez Gene: 6400

Expression Profile of SEL1L Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-122-5p YES YES NO hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-135a-5p YES YES NO hsa-miR-135b-5p YES YES NO hsa-miR-138-5p YES YES NO hsa-miR-140-5p NO YES YES hsa-miR-143-3p YES YES NO hsa-miR-144-3p YES NO YES hsa-miR-149-5p YES NO YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-188-5p YES NO YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-205-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-217 YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-371a-5p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-495-3p YES YES YES hsa-miR-543 YES YES YES Display: