ctcRbase

Entry Detail

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General Information

Database ID: SKCM03680 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TDP2 Full Name: tyrosyl-DNA phosphodiesterase 2 Category: mRNA Synonyms: AD022|EAP2|EAPII|TTRAP|dJ30M3.3|hTDP2 Chromosome: chr6 Strand: - Coordinate: Start Site(bp): 24649977 End Site(bp): 24667033 Gene Summary: This gene encodes a member of a superfamily of divalent cation-dependent phosphodiesterases. The encoded protein associates with CD40, tumor necrosis factor (TNF) receptor-75 and TNF receptor associated factors (TRAFs), and inhibits nuclear factor-kappa-B activation. This protein has sequence and structural similarities with APE1 endonuclease, which is involved in both DNA repair and the activation of transcription factors. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000111802 HGNC ID: HGNC:17768 Entrez Gene: 51567

Expression Profile of TDP2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1-3p YES YES NO hsa-miR-183-5p YES YES NO hsa-miR-206 YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-613 YES YES NO hsa-miR-653-5p YES YES NO Display: