ctcRbase

Entry Detail

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General Information

Database ID: SKCM03794 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: COG2 Full Name: component of oligomeric golgi complex 2 Category: mRNA Synonyms: CDG2Q|LDLC Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 230642489 End Site(bp): 230693982 Gene Summary: This gene encodes a subunit of the conserved oligomeric Golgi complex that is required for maintaining normal structure and activity of the Golgi complex. The encoded protein specifically interacts with the USO1 vesicle docking protein and may be necessary for normal Golgi ribbon formation and trafficking of Golgi enzymes. Mutations of this gene are associated with abnormal glycosylation within the Golgi apparatus. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Feb 2009] External Links: Ensembl ID: ENSG00000135775 HGNC ID: HGNC:6546 Entrez Gene: 22796

Expression Profile of COG2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-214-3p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-375 YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-411-5p YES YES NO Display: