ctcRbase

Entry Detail

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General Information

Database ID: SKCM03893 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: PDPK1 Full Name: 3-phosphoinositide dependent protein kinase 1 Category: mRNA Synonyms: PDK1|PDPK2|PDPK2P|PRO0461 Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 2537964 End Site(bp): 2603188 Gene Summary: NA External Links: Ensembl ID: ENSG00000140992 HGNC ID: HGNC:8816 Entrez Gene: 5170

Expression Profile of PDPK1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES NO YES hsa-miR-129-5p YES YES YES hsa-miR-15a-5p YES NO NO hsa-miR-15b-5p YES NO NO hsa-miR-16-5p YES NO NO hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-195-5p YES NO NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-214-3p YES NO NO hsa-miR-223-3p YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-31-5p YES NO YES hsa-miR-33b-5p YES NO YES hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-375 YES NO YES hsa-miR-378a-3p YES NO YES hsa-miR-382-5p YES YES YES hsa-miR-410-3p YES NO YES hsa-miR-421 YES NO YES hsa-miR-422a YES NO YES hsa-miR-424-5p YES NO NO hsa-miR-429 YES YES YES hsa-miR-497-5p YES NO NO hsa-miR-503-5p YES NO NO hsa-miR-665 YES NO YES Display: