ctcRbase

Entry Detail

---



General Information

Database ID: SKCM03900 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HPCAL1 Full Name: hippocalcin like 1 Category: mRNA Synonyms: BDR1|HLP2|VILIP-3 Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 10302889 End Site(bp): 10427617 Gene Summary: The protein encoded by this gene is a member of neuron-specific calcium-binding proteins family found in the retina and brain. It is highly similar to human hippocalcin protein and nearly identical to the rat and mouse hippocalcin like-1 proteins. It may be involved in the calcium-dependent regulation of rhodopsin phosphorylation and may be of relevance for neuronal signalling in the central nervous system. Several alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Apr 2012] External Links: Ensembl ID: ENSG00000115756 HGNC ID: HGNC:5145 Entrez Gene: 3241

Expression Profile of HPCAL1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-140-3p YES NO YES hsa-miR-144-3p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-421 YES YES NO Display: