Entry Detail



General Information

Database ID:SKCM03902
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:PTCD1
Full Name:pentatricopeptide repeat domain 1
Category:mRNA
Synonyms:-
Chromosome:chr7
Strand:-
Coordinate:
Start Site(bp):99416739End Site(bp):99466163
Gene Summary:This gene encodes a mitochondrial protein that binds leucine tRNAs and other mitochondrial RNAs and plays a role in the regulation of translation. Increased expression of this gene results in decreased mitochondrial leucine tRNA levels. Naturally occurring read-through transcription exists between upstream ATP5J2 (ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2) and this gene. [provided by RefSeq, Aug 2015]
External Links:
Ensembl ID:ENSG00000106246
HGNC ID:HGNC:22198
Entrez Gene:26024



Expression Profile of PTCD1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-182-5p
YES
YES
NO
hsa-miR-205-5p
YES
YES
NO
hsa-miR-421
YES
YES
NO
hsa-miR-454-3p
YES
YES
NO
hsa-miR-505-3p
YES
YES
YES
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