ctcRbase

Entry Detail

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General Information

Database ID: SKCM03910 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TUSC1 Full Name: tumor suppressor candidate 1 Category: mRNA Synonyms: CCDC89B|TSG-9|TSG9 Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 25676389 End Site(bp): 25678440 Gene Summary: This gene is located within the region of chromosome 9p that harbors tumor suppressor genes critical in carcinogenesis. It is an intronless gene which is downregulated in non-small-cell lung cancer and small-cell lung cancer cell lines, suggesting that it may play a role in lung tumorigenesis. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000198680 HGNC ID: HGNC:31010 Entrez Gene: 286319

Expression Profile of TUSC1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-1271-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-340-5p YES NO YES hsa-miR-409-3p YES NO YES hsa-miR-519d-3p YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-96-5p YES YES NO Display: