ctcRbase

Entry Detail

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General Information

Database ID: SKCM03939 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RLIM Full Name: ring finger protein, LIM domain interacting Category: mRNA Synonyms: MRX61|NY-REN-43|RNF12|TOKAS Chromosome: chrX Strand: - Coordinate: Start Site(bp): 74585217 End Site(bp): 74614617 Gene Summary: The protein encoded by this gene is a RING-H2 zinc finger protein. It has been shown to be an E3 ubiquitin protein ligase that targets LIM domain binding 1 (LDB1/CLIM), and causes proteasome-dependent degradation of LDB1. This protein and LDB1 are co-repressors of LHX1/LIM-1, a homeodomain transcription factor. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Feb 2009] External Links: Ensembl ID: ENSG00000131263 HGNC ID: HGNC:13429 Entrez Gene: 51132

Expression Profile of RLIM Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES NO YES hsa-miR-139-5p YES NO YES hsa-miR-140-5p YES NO YES hsa-miR-148a-3p YES NO YES hsa-miR-148b-3p YES NO YES hsa-miR-152-3p YES NO YES hsa-miR-155-5p YES NO YES hsa-miR-190a-5p YES NO YES hsa-miR-190b YES NO YES hsa-miR-199a-5p NO YES YES hsa-miR-199b-5p NO YES YES hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-33a-5p YES NO YES hsa-miR-33b-5p YES NO YES hsa-miR-489-3p YES NO YES Display: