ctcRbase

Entry Detail

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General Information

Database ID: SKCM03944 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: MATN2 Full Name: matrilin 2 Category: mRNA Synonyms: - Chromosome: chr8 Strand: + Coordinate: Start Site(bp): 97868840 End Site(bp): 98036716 Gene Summary: This gene encodes a member of the von Willebrand factor A domain containing protein family. This family of proteins is thought to be involved in the formation of filamentous networks in the extracellular matrices of various tissues. This protein contains five von Willebrand factor A domains. The specific function of this gene has not yet been determined. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000132561 HGNC ID: HGNC:6908 Entrez Gene: 4147

Expression Profile of MATN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES NO YES hsa-miR-140-5p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-153-3p YES YES NO hsa-miR-199a-5p YES YES YES hsa-miR-199b-5p YES YES YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-208a-3p YES YES NO hsa-miR-21-5p YES YES YES hsa-miR-25-3p YES YES NO hsa-miR-300 YES YES YES hsa-miR-32-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-363-3p YES YES NO hsa-miR-367-3p YES YES NO hsa-miR-381-3p YES YES YES hsa-miR-382-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-448 YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-590-5p YES YES YES hsa-miR-599 YES YES NO hsa-miR-92a-3p YES YES NO hsa-miR-92b-3p YES YES NO Display: