ctcRbase

Entry Detail

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General Information

Database ID: SKCM03952 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: BRD4 Full Name: bromodomain containing 4 Category: mRNA Synonyms: CAP|HUNK1|HUNKI|MCAP Chromosome: chr19 Strand: - Coordinate: Start Site(bp): 15235519 End Site(bp): 15332545 Gene Summary: The protein encoded by this gene is homologous to the murine protein MCAP, which associates with chromosomes during mitosis, and to the human RING3 protein, a serine/threonine kinase. Each of these proteins contains two bromodomains, a conserved sequence motif which may be involved in chromatin targeting. This gene has been implicated as the chromosome 19 target of translocation t(15;19)(q13;p13.1), which defines an upper respiratory tract carcinoma in young people. Two alternatively spliced transcript variants have been described. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000141867 HGNC ID: HGNC:13575 Entrez Gene: 23476

Expression Profile of BRD4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES NO YES hsa-miR-133a-3p YES YES NO hsa-miR-133b YES YES NO hsa-miR-141-3p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-204-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-219a-5p YES YES NO hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-326 YES YES NO hsa-miR-329-3p YES YES YES hsa-miR-330-5p YES YES NO hsa-miR-362-3p YES YES YES hsa-miR-376c-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-599 YES YES NO hsa-miR-758-3p YES YES NO hsa-miR-9-5p YES YES YES Display: