ctcRbase

Entry Detail

---



General Information

Database ID: SKCM03955 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: ATL3 Full Name: atlastin GTPase 3 Category: mRNA Synonyms: HSN1F Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 63624087 End Site(bp): 63671921 Gene Summary: This gene encodes a member of a family of dynamin-like, integral membrane GTPases. The encoded protein is required for the proper formation of the network of interconnected tubules of the endoplasmic reticulum. Mutations in this gene may be associated with hereditary sensory neuropathy type IF. Alternatively spliced transcript variants that encode distinct isoforms have been described. [provided by RefSeq, Feb 2014] External Links: Ensembl ID: ENSG00000184743 HGNC ID: HGNC:24526 Entrez Gene: 25923

Expression Profile of ATL3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-124-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-17-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-22-3p YES YES NO hsa-miR-301a-3p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-93-5p YES YES YES Display: