ctcRbase

Entry Detail

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General Information

Database ID: SKCM04044 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: MYO1C Full Name: myosin IC Category: mRNA Synonyms: MMI-beta|MMIb|NMI|myr2 Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 1464098 End Site(bp): 1492812 Gene Summary: This gene encodes a member of the unconventional myosin protein family, which are actin-based molecular motors. The protein is found in the cytoplasm, and one isoform with a unique N-terminus is also found in the nucleus. The nuclear isoform associates with RNA polymerase I and II and functions in transcription initiation. The mouse ortholog of this protein also functions in intracellular vesicle transport to the plasma membrane. Multiple transcript variants encoding different isoforms have been found for this gene. The related gene myosin IE has been referred to as myosin IC in the literature, but it is a distinct locus on chromosome 19. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000197879 HGNC ID: HGNC:7597 Entrez Gene: 4641

Expression Profile of MYO1C Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES NO YES hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-137 YES NO YES hsa-miR-138-5p YES NO YES hsa-miR-142-5p YES NO YES hsa-miR-150-5p YES NO YES hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES NO YES hsa-miR-16-5p YES NO YES hsa-miR-182-5p YES NO YES hsa-miR-18a-5p YES YES YES hsa-miR-18b-5p YES YES YES hsa-miR-195-5p YES NO YES hsa-miR-204-5p YES NO YES hsa-miR-208a-3p YES YES NO hsa-miR-208b-3p YES YES NO hsa-miR-211-5p YES NO YES hsa-miR-299-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-326 YES YES YES hsa-miR-330-3p YES NO YES hsa-miR-330-5p YES YES YES hsa-miR-339-5p YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-384 YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-483-3p YES NO YES hsa-miR-497-5p YES NO YES hsa-miR-874-3p YES YES NO hsa-miR-9-5p YES YES YES hsa-miR-96-5p YES NO YES Display: