ctcRbase

Entry Detail

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General Information

Database ID: SKCM04053 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RAPGEF6 Full Name: Rap guanine nucleotide exchange factor 6 Category: mRNA Synonyms: KIA001LB|PDZ-GEF2|PDZGEF2|RA-GEF-2|RAGEF2 Chromosome: chr5 Strand: - Coordinate: Start Site(bp): 131423921 End Site(bp): 131635236 Gene Summary: NA External Links: Ensembl ID: ENSG00000158987 HGNC ID: HGNC:20655 Entrez Gene: 51735

Expression Profile of RAPGEF6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-140-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-217 YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-362-5p YES NO YES hsa-miR-365a-3p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-422a YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-490-3p YES YES NO Display: