ctcRbase

Entry Detail

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General Information

Database ID: SKCM04065 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CDKAL1 Full Name: CDK5 regulatory subunit associated protein 1 like 1 Category: mRNA Synonyms: - Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 20534457 End Site(bp): 21232404 Gene Summary: The protein encoded by this gene is a member of the methylthiotransferase family. The function of this gene is not known. Genome-wide association studies have linked single nucleotide polymorphisms in an intron of this gene with susceptibilty to type 2 diabetes. [provided by RefSeq, May 2010] External Links: Ensembl ID: ENSG00000145996 HGNC ID: HGNC:21050 Entrez Gene: 54901

Expression Profile of CDKAL1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-145-5p NO YES NO hsa-miR-186-5p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-873-5p NO YES YES Display: