ctcRbase

Entry Detail

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General Information

Database ID: SKCM04101 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RPGRIP1L Full Name: RPGRIP1 like Category: mRNA Synonyms: CORS3|FTM|JBTS7|MKS5|NPHP8|PPP1R134 Chromosome: chr16 Strand: - Coordinate: Start Site(bp): 53597683 End Site(bp): 53703938 Gene Summary: The protein encoded by this gene can localize to the basal body-centrosome complex or to primary cilia and centrosomes in ciliated cells. The encoded protein has been found to interact with nephrocystin-4. Defects in this gene are a cause of Joubert syndrome type 7 (JBTS7) and Meckel syndrome type 5 (MKS5). [provided by RefSeq, Jun 2016] External Links: Ensembl ID: ENSG00000103494 HGNC ID: HGNC:29168 Entrez Gene: 23322

Expression Profile of RPGRIP1L Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-128-3p YES YES YES hsa-miR-137 YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-153-3p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-448 YES YES NO hsa-miR-455-5p YES YES NO hsa-miR-7-5p YES YES NO Display: