ctcRbase

Entry Detail

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General Information

Database ID: SKCM04105 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RBM12 Full Name: RNA binding motif protein 12 Category: mRNA Synonyms: HRIHFB2091|SCZD19|SWAN Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 35648925 End Site(bp): 35664956 Gene Summary: This gene encodes a protein that contains several RNA-binding motifs, potential transmembrane domains, and proline-rich regions. This gene and the gene for copine I overlap at map location 20q11.21. Alternative splicing in the 5' UTR results in four transcript variants. All variants encode the same protein. [provided by RefSeq, Nov 2010] External Links: Ensembl ID: ENSG00000244462 HGNC ID: HGNC:9898 Entrez Gene: 10137

Expression Profile of RBM12 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-132-3p YES YES YES hsa-miR-137 YES YES YES hsa-miR-141-3p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-154-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-205-5p YES YES YES hsa-miR-212-3p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-31-5p YES NO YES hsa-miR-329-3p YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-335-5p YES NO YES hsa-miR-338-3p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-409-3p YES NO YES hsa-miR-410-3p YES YES NO hsa-miR-422a YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-433-3p YES YES YES hsa-miR-486-5p YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-490-3p YES YES YES hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES NO YES hsa-miR-497-5p YES YES YES hsa-miR-506-3p YES YES NO Display: