ctcRbase

Entry Detail

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General Information

Database ID: SKCM04148 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: HPS3 Full Name: HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 Category: mRNA Synonyms: BLOC2S1|SUTAL Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 149129584 End Site(bp): 149173732 Gene Summary: This gene encodes a protein containing a potential clathrin-binding motif, consensus dileucine signals, and tyrosine-based sorting signals for targeting to vesicles of lysosomal lineage. The encoded protein may play a role in organelle biogenesis associated with melanosomes, platelet dense granules, and lysosomes. Mutations in this gene are associated with Hermansky-Pudlak syndrome type 3. [provided by RefSeq, Apr 2015] External Links: Ensembl ID: ENSG00000163755 HGNC ID: HGNC:15597 Entrez Gene: 84343

Expression Profile of HPS3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-147a YES NO NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-296-3p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO Display: