Entry Detail



General Information

Database ID:SKCM04188
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:ACIN1
Full Name:apoptotic chromatin condensation inducer 1
Category:mRNA
Synonyms:ACINUS|ACN|fSAP152
Chromosome:chr14
Strand:-
Coordinate:
Start Site(bp):23058564End Site(bp):23095614
Gene Summary:Apoptosis is defined by several morphologic nuclear changes, including chromatin condensation and nuclear fragmentation. This gene encodes a nuclear protein that induces apoptotic chromatin condensation after activation by caspase-3, without inducing DNA fragmentation. This protein has also been shown to be a component of a splicing-dependent multiprotein exon junction complex (EJC) that is deposited at splice junctions on mRNAs, as a consequence of pre-mRNA splicing. It may thus be involved in mRNA metabolism associated with splicing. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Oct 2011]
External Links:
Ensembl ID:ENSG00000100813
HGNC ID:HGNC:17066
Entrez Gene:22985



Expression Profile of ACIN1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-106a-5p
YES
YES
YES
hsa-miR-106b-5p
YES
YES
YES
hsa-miR-142-5p
YES
NO
YES
hsa-miR-17-5p
YES
YES
YES
hsa-miR-18a-5p
YES
YES
NO
hsa-miR-18b-5p
YES
YES
NO
hsa-miR-20a-5p
YES
YES
YES
hsa-miR-20b-5p
YES
YES
YES
hsa-miR-340-5p
YES
YES
YES
hsa-miR-495-3p
YES
YES
NO
hsa-miR-519d-3p
YES
YES
YES
hsa-miR-93-5p
YES
YES
YES
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