Entry Detail



General Information

Database ID:SKCM04197
Cancer Type:melanoma
Dataset:GSE38495
CTCs/CTM Isolation Method:immunomagnetic purification



Gene Information

ncRNA Symbol:TCOF1
Full Name:treacle ribosome biogenesis factor 1
Category:mRNA
Synonyms:MFD1|TCS|TCS1|treacle
Chromosome:chr5
Strand:+
Coordinate:
Start Site(bp):150357639End Site(bp):150400308
Gene Summary:This gene encodes a nucleolar protein with a LIS1 homology domain. The protein is involved in ribosomal DNA gene transcription through its interaction with upstream binding factor (UBF). Mutations in this gene have been associated with Treacher Collins syndrome, a disorder which includes abnormal craniofacial development. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2008]
External Links:
Ensembl ID:ENSG00000070814
HGNC ID:HGNC:11654
Entrez Gene:6949



Expression Profile of TCOF1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-129-5p
YES
YES
NO
hsa-miR-155-5p
YES
YES
NO
hsa-miR-194-5p
YES
YES
NO
hsa-miR-299-3p
YES
YES
NO
hsa-miR-377-3p
YES
YES
YES
hsa-miR-7-5p
YES
YES
NO
Display: