ctcRbase

Entry Detail

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General Information

Database ID: SKCM04218 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TMEM189 Full Name: transmembrane protein 189 Category: mRNA Synonyms: KUA Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 50118254 End Site(bp): 50153734 Gene Summary: Co-transcription of this gene and the neighboring downstream gene (ubiquitin-conjugating enzyme E2 variant 1) generates a rare read-through transcript, which encodes a fusion protein comprised of sequence sharing identity with each individual gene product. The protein encoded by this individual gene lacks a UEV1 domain but includes three transmembrane regions. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2009] External Links: Ensembl ID: ENSG00000240849 HGNC ID: HGNC:16735 Entrez Gene: 387521

Expression Profile of TMEM189 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES NO hsa-miR-135a-5p YES NO YES hsa-miR-135b-5p YES NO YES hsa-miR-182-5p YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-421 YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-874-3p YES YES NO Display: