ctcRbase

Entry Detail

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General Information

Database ID: SKCM04258 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SLC35C2 Full Name: solute carrier family 35 member C2 Category: mRNA Synonyms: BA394O2.1|C20orf5|CGI-15|OVCOV1 Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 46345980 End Site(bp): 46364458 Gene Summary: This gene encodes a member of the triose-phosphate transporter protein family. This gene is regulated by oxygen tension, is induced in hypoxic trophoblast cells, and is overexpressed in ovarian cancer. Alternative splicing results in multiple transcript variants. A pseudogene of this gene has been defined on the X chromosome. [provided by RefSeq, Jul 2013] External Links: Ensembl ID: ENSG00000080189 HGNC ID: HGNC:17117 Entrez Gene: 51006

Expression Profile of SLC35C2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-543 YES YES NO Display: