ctcRbase

Entry Detail

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General Information

Database ID: SKCM04264 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SETD6 Full Name: SET domain containing 6 Category: mRNA Synonyms: - Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 58515479 End Site(bp): 58521181 Gene Summary: This gene encodes a methyltransferase that adds a methyl group to the histone H2AZ, which is involved in nuclear receptor-dependent transcription. The protein also interacts with several endogenous proteins which are involved in nuclear hormone receptor signaling. A related pseudogene is located on chromosome 2. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016] External Links: Ensembl ID: ENSG00000103037 HGNC ID: HGNC:26116 Entrez Gene: 79918

Expression Profile of SETD6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES YES NO hsa-miR-125b-5p YES YES NO hsa-miR-137 YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-496 YES YES NO hsa-miR-590-5p YES YES NO Display: