ctcRbase

Entry Detail

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General Information

Database ID: SKCM04273 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RREB1 Full Name: ras responsive element binding protein 1 Category: mRNA Synonyms: FINB|HNT|LZ321|RREB-1|Zep-1 Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 7107597 End Site(bp): 7251980 Gene Summary: The protein encoded by this gene is a zinc finger transcription factor that binds to RAS-responsive elements (RREs) of gene promoters. It has been shown that the calcitonin gene promoter contains an RRE and that the encoded protein binds there and increases expression of calcitonin, which may be involved in Ras/Raf-mediated cell differentiation. Multiple transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Dec 2009] External Links: Ensembl ID: ENSG00000124782 HGNC ID: HGNC:10449 Entrez Gene: 6239

Expression Profile of RREB1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-124-3p YES YES YES hsa-miR-125a-5p NO YES YES hsa-miR-125b-5p NO YES YES hsa-miR-128-3p NO YES YES hsa-miR-139-5p YES YES NO hsa-miR-144-3p YES NO YES hsa-miR-145-5p YES YES YES hsa-miR-155-5p YES YES NO hsa-miR-183-5p YES NO YES hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-205-5p YES YES NO hsa-miR-208a-3p YES YES NO hsa-miR-208b-3p YES YES NO hsa-miR-214-3p YES NO NO hsa-miR-221-3p NO YES YES hsa-miR-222-3p NO YES YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-27a-3p NO YES YES hsa-miR-27b-3p NO YES YES hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-31-5p NO YES YES hsa-miR-329-3p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-369-3p YES NO NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-875-5p YES YES NO hsa-miR-876-5p YES YES NO Display: