ctcRbase

Entry Detail

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General Information

Database ID: SKCM04294 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: CNN2 Full Name: calponin 2 Category: mRNA Synonyms: - Chromosome: chr19 Strand: + Coordinate: Start Site(bp): 1026581 End Site(bp): 1039068 Gene Summary: The protein encoded by this gene, which can bind actin, calmodulin, troponin C, and tropomyosin, may function in the structural organization of actin filaments. The encoded protein could play a role in smooth muscle contraction and cell adhesion. Several pseudogenes of this gene have been identified, and are present on chromosomes 1, 2, 3, 6, 9, 11, 13, 15, 16, 21 and 22. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jan 2015] External Links: Ensembl ID: ENSG00000064666 HGNC ID: HGNC:2156 Entrez Gene: 1265

Expression Profile of CNN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-137 YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-24-3p YES NO YES hsa-miR-384 YES YES NO hsa-miR-491-5p YES NO YES hsa-miR-625-5p YES NO NO Display: