ctcRbase

Entry Detail

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General Information

Database ID: SKCM04304 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: RBBP5 Full Name: RB binding protein 5, histone lysine methyltransferase complex subunit Category: mRNA Synonyms: RBQ3|SWD1 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 205086142 End Site(bp): 205122015 Gene Summary: This gene encodes a ubiquitously expressed nuclear protein which belongs to a highly conserved subfamily of WD-repeat proteins. The encoded protein binds directly to retinoblastoma protein, which regulates cell proliferation. It interacts preferentially with the underphosphorylated retinoblastoma protein via the E1A-binding pocket B. Three alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, Jul 2010] External Links: Ensembl ID: ENSG00000117222 HGNC ID: HGNC:9888 Entrez Gene: 5929

Expression Profile of RBBP5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-134-5p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-204-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-448 YES NO YES hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-488-3p YES YES YES hsa-miR-494-3p YES YES NO Display: