ctcRbase

Entry Detail

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General Information

Database ID: SKCM04311 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: GJC1 Full Name: gap junction protein gamma 1 Category: mRNA Synonyms: CX45|GJA7 Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 44798448 End Site(bp): 44830816 Gene Summary: This gene is a member of the connexin gene family. The encoded protein is a component of gap junctions, which are composed of arrays of intercellular channels that provide a route for the diffusion of low molecular weight materials from cell to cell. Alternatively spliced transcript variants encoding the same isoform have been described. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000182963 HGNC ID: HGNC:4280 Entrez Gene: 10052

Expression Profile of GJC1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-125a-5p YES NO YES hsa-miR-125b-5p YES NO YES hsa-miR-1271-5p YES YES YES hsa-miR-134-5p YES YES YES hsa-miR-137 YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-324-5p YES NO YES hsa-miR-331-3p YES NO YES hsa-miR-421 YES NO YES hsa-miR-455-5p YES NO YES hsa-miR-7-5p YES YES YES hsa-miR-9-5p YES NO YES hsa-miR-96-5p YES YES YES hsa-miR-98-5p YES YES YES Display: