ctcRbase

Entry Detail

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General Information

Database ID: SKCM04319 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: SYT11 Full Name: synaptotagmin 11 Category: mRNA Synonyms: SYT12|sytXI Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 155859509 End Site(bp): 155885199 Gene Summary: This gene is a member of the synaptotagmin gene family and encodes a protein similar to other family members that are known calcium sensors and mediate calcium-dependent regulation of membrane trafficking in synaptic transmission. The encoded protein is also a substrate for ubiquitin-E3-ligase parkin. The gene has previously been referred to as synaptotagmin XII but has been renamed synaptotagmin XI to be consistent with mouse and rat official nomenclature. [provided by RefSeq, Apr 2010] External Links: Ensembl ID: ENSG00000132718 HGNC ID: HGNC:19239 Entrez Gene: 23208

Expression Profile of SYT11 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-134-5p YES NO YES hsa-miR-139-5p YES YES NO hsa-miR-144-3p YES YES YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-300 NO YES YES hsa-miR-377-3p NO YES YES hsa-miR-381-3p NO YES YES Display: