ctcRbase

Entry Detail

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General Information

Database ID: SKCM04352 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: AP3B1 Full Name: adaptor related protein complex 3 subunit beta 1 Category: mRNA Synonyms: ADTB3|ADTB3A|HPS|HPS2|PE Chromosome: chr5 Strand: - Coordinate: Start Site(bp): 78000525 End Site(bp): 78294755 Gene Summary: This gene encodes a protein that may play a role in organelle biogenesis associated with melanosomes, platelet dense granules, and lysosomes. The encoded protein is part of the heterotetrameric AP-3 protein complex which interacts with the scaffolding protein clathrin. Mutations in this gene are associated with Hermansky-Pudlak syndrome type 2. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2012] External Links: Ensembl ID: ENSG00000132842 HGNC ID: HGNC:566 Entrez Gene: 8546

Expression Profile of AP3B1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-137 YES YES NO hsa-miR-142-3p YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-214-3p YES YES NO hsa-miR-25-3p YES YES NO hsa-miR-32-5p YES YES NO hsa-miR-329-3p YES YES YES hsa-miR-335-5p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-362-3p YES YES YES hsa-miR-363-3p YES YES NO hsa-miR-367-3p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-433-3p YES YES YES hsa-miR-448 YES YES NO hsa-miR-488-3p YES YES YES hsa-miR-497-5p YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-92a-3p YES YES NO hsa-miR-92b-3p YES YES NO hsa-miR-9-5p YES YES YES Display: