ctcRbase

Entry Detail

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General Information

Database ID: SKCM04388 Cancer Type: melanoma Dataset: GSE38495 CTCs/CTM Isolation Method: immunomagnetic purification

Gene Information

ncRNA Symbol: TLNRD1 Full Name: talin rod domain containing 1 Category: mRNA Synonyms: MESDC1 Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 81000944 End Site(bp): 81005788 Gene Summary: This gene encodes a protein that is regulated by micro RNA MiR-574-3, and is thought to have an oncogenic function in human bladder cancer. A similar gene in mouse is located in a chromosomal region critical for differentiation of mesoderm, which affects embryo patterning and the formation of heart, muscle, blood, skeleton and the urogenital system. The mouse gene is expressed in early development, and in the adult. [provided by RefSeq, Nov 2016] External Links: Ensembl ID: ENSG00000140406 HGNC ID: HGNC:13519 Entrez Gene: 59274

Expression Profile of TLNRD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-128-3p YES NO YES hsa-miR-145-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-300 YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-429 YES YES NO hsa-miR-494-3p YES YES YES hsa-miR-543 YES YES YES hsa-miR-625-5p YES NO NO hsa-miR-7-5p YES YES YES hsa-miR-9-5p YES YES YES hsa-miR-98-5p YES NO YES Display: